Job Description P76114 Confidence 93.24% Date Thu Jan 5 12:19:06 GMT 2012 Rank 163 Aligned Residues 99 % Identity 10% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80											.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	L	S	I	G	A	L	K	P	G	A	R	L	I	T	K	N	L	A	E	Q	L	.	.	.	.	G	M	S	I	T	P	V	R	E	A	L	L	R	L	V	S	V	N	A	L	S	V	A	P	A	Q	A	F	T	V	P	E	V	G	K	R	.	.	.	.	.	.	.	.	.	.	Q	L	D	E	I	N	R
Query Conservation																									.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Alig confidence													.												.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		W	D	V	X	N	I	I	W	D	K	K	.	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y
Template Known Secondary structure											S	S	.	S												T	T	S																	T	T	S							T	T								S
Template Predicted Secondary structure													.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Y	E	L	E	L	M	A	V	A	L	A	V	E	N	L	T	P	Q	D	L	A	E	L	Q	E	L	L	E	K	L	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	D	X	K	S	L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L	R	D	I	L	N	D	I	S	K
Template Known Secondary structure		T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions