Return to main results Retrieve Phyre Job Id

Job DescriptionP76114
Confidence28.06%DateThu Jan 5 12:19:06 GMT 2012
Rank481Aligned Residues47
% Identity17%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60...
Predicted Secondary structure 
















Query SS confidence 

















































Query Sequence  LQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNA
Query Conservation 
 
   
   
  
    
  


 


   



  




  
   

Alig confidence 













...
































Template Conservation     
     

   ...    
 
  

     
   
 
 

   
 

Template Sequence  AGIIRDLLIWLEGH. . . LDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAI
Template Known Secondary structure  TT...SSSS


TTTSS
SS
Template Predicted Secondary structure  ...











Template SS confidence 

















































   4.....10....... ..20.........30.........40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions