Job Description P76114 Confidence 97.64% Date Thu Jan 5 12:19:06 GMT 2012 Rank 31 Aligned Residues 124 % Identity 6% Template c3lwfD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution Resolution 2.06 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		K	H	V	S	L	T	L	Q	V	E	N	D	L	K	H	Q	L	S	I	G	A	L	K	P	G	A	R	L	I	T	K	N	L	A	E	Q	L	G	M	S	I	T	P	V	R	E	A	L	L	R	L	V	S	V	N	A	L	S	V	A	P	A	Q	.	A	F	T	V	P	E	V	G	K	R	Q	L	D	E	I	N
Query Conservation																																																																	.
Alig confidence																							.	.																																									.
Template Conservation																							.	.
Template Sequence		X	K	I	T	T	K	G	R	Y	G	L	T	I	T	L	E	L	A	K	R	I	.	.	G	D	G	P	I	S	L	R	S	I	A	Q	D	K	N	L	S	E	H	Y	L	E	Q	L	I	G	P	L	R	N	A	G	I	V	K	S	I	R	G	A	H	G	G	Y	V	L	N	G	D	P	E	K	I	T	A	G	D
Template Known Secondary structure		S																			T	T	.	.	T	S			B										T																T	T	S						S	T	T							S		T	T	T		B
Template Predicted Secondary structure																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	R	Y	E	L	E	L	M	A	V	A	L	A	V	E	N	L	T	P	Q	D	L	A	E	L	Q	E	L	L	E	K	L	Q	Q	A	Q	E	K	G	D	M	E	Q	I	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	R	T	L	E	G	P	I	V	L	V	E	S	X	E	D	E	E	A	A	Q	R	E	L	W	T	R	X	R	N	A	V	R	D	V	L	D	Q	T	T	L	S	D	L	L	K
Template Known Secondary structure							S					S					T	T																								B
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions