Job Description P76114 Confidence 33.85% Date Thu Jan 5 12:19:06 GMT 2012 Rank 425 Aligned Residues 45 % Identity 13% Template c2zxjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein walr; PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus Resolution 1.87 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		K	P	G	A	R	L	I	T	K	N	L	A	E	Q	L	.	.	.	.	.	G	M	S	I	T	P	V	R	E	A	L	L	R	L	V	S	.	.	.	.	.	.	.	.	V	N	A	L	S	V	A	P	A	Q	A	F	T	V
Query Conservation																	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	I	R	R	L	R	E	K	I	E	D	D	P	S	H	P	E	Y	I	V	T	R	R	G	V	G	Y	F	L
Template Known Secondary structure		T	T	T													T		T	T			S		T																S	S	T	T	S		S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions