Return to main results Retrieve Phyre Job Id

Job DescriptionP76114
Confidence93.78%DateThu Jan 5 12:19:06 GMT 2012
Rank151Aligned Residues42
% Identity12%Templatec2xroE_
PDB info PDB header:dna-binding protein/dnaChain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70...
Predicted Secondary structure 












Query SS confidence 









































Query Sequence  GARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFT
Query Conservation 
  


 


   



  




  
   


      
  
Alig confidence 









































Template Conservation       
 


  


  


 


 

   
 
        
Template Sequence  PHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGPAGGF
Template Known Secondary structure  TT
B
SS

TTTS
SSSS
Template Predicted Secondary structure 















Template SS confidence 









































   31........40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions