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Job Description | P76114 | Confidence | 95.78% | Date | Thu Jan 5 12:19:06 GMT 2012 |
Rank | 84 | Aligned Residues | 95 |
% Identity | 19% | Template | c2nyxB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; |
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
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Resolution | 2.30 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | R | L | I | T | K | N | L | A | E | Q | L | G | M | S | I | T | P | V | R | E | A | L | L | R | L | V | S | V | N | A | L | S | V | A | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | P | I | N | L | A | T | L | A | T | L | L | G | V | Q | P | S | A | T | G | R | X | V | D | R | L | V | G | A | E | L | I | D | R | L | P | H | P | T | S | R | R | E | L | L | A | A | L | T | K | R | G | R | D | V | V | R | Q | V | T | E | H | R | R | T | E | I | A | R | I | V | E | Q | X | A | P | A | E | R | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
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111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | L | Q | E | L | L | E | K | L | Q | Q | A | Q | E | K | G | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | L | V | R | A | L | T | A | F | T | E | A | G | G | E | P | D |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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