 |
Job Description | P76114 | Confidence | 53.23% | Date | Thu Jan 5 12:19:06 GMT 2012 |
Rank | 329 | Aligned Residues | 37 |
% Identity | 19% | Template | c1r71B_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:transcriptional repressor protein korb; |
PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna
|
Resolution | 2.20 Å |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | N | D | L | K | H | Q | L | S | I | G | A | L | K | P | G | A | R | L | I | T | K | N | L | A | E | Q | L | G | M | S | I | T | P | V | R | E | A | L | L | R | L | V |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . |   |
|   |   |
|
|
|   |   |
|
|   |
|   |
|   |
|
|   |   |
|   |
|   |   |
Template Sequence |   |
I | A | D | F | I | G | R | E | L | A | K | G | . |
. |
. |
. |
. |
. |
. |
K | K | K | G | D | I | A | K | E | I | G | K | S | P | A | F | I | T | Q | H | V | T | L | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | G | G | G | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|