 |
Job Description | P0CF84 | Confidence | 67.73% | Date | Thu Jan 5 11:31:42 GMT 2012 |
Rank | 354 | Aligned Residues | 25 |
% Identity | 12% | Template | d1v4ra1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| GntR-like transcriptional regulators
|
Resolution | UNK |
|
  |   |
11 | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | F | . |
S | I | K | A | M | C | R | V | L | R | V | A | R | S | G | W | Y | T | W | C | Q | R |
Query Conservation |   |
  |   |   | . |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |
|
|   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
Template Sequence |   |
D | T | L | P | S | V | A | D | I | R | A | Q | F | G | V | A | A | K | T | V | S | R | A | L | A | V |
Template Known Secondary structure |   |
S | B |
|
|
|  |  |  |  |  |  |  | S | S | S |
| T | T |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|