Job Description P14294 Confidence 44.22% Date Thu Jan 5 11:33:58 GMT 2012 Rank 105 Aligned Residues 99 % Identity 14% Template d1yg2a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.20

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		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.				.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		D	L	K	K	I	L	R	A	T	D	G	L	G	T	E	A	T	R	A	G	I	.	.	.	I	E	L	L	F	K	R	G	F	L	T	K	K	G	R	Y	I	H	S	T	D	A	G	K	A	L	F	H	S	L	P	E	M	A	T	R	P	D	M	T	A	H	W	E	S	V	L	T	Q	I	S	E	K	Q	C	R
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																							.
Template Conservation																																																																.
Template Sequence		D	I	T	K	E	F	S	A	S	I	G	Y	F	W	K	A	S	H	Q	Q	V	Y	R	E	L	N	K	M	G	E	Q	G	L	V	T	C	V	L	E	V	Y	S	I	T	Q	A	G	R	S	A	L	G	E	W	F	D	Q	P	T	A	H	P	.	T	V	R	D	E	F	S	A	K	L	M	A	C	S	V	Q	S
Template Known Secondary structure								T	T	G	G	G	G	T																		T	T	S																								S						.												G	G	G	T	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	D	F	M	Q	P	L	V	G	T	L	Y	Q	L	I	D	Q	A	K	R	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	P	Y	R	L	Q	L	A	E	L	V	E	E	S	R	K	L	V	A	H	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions