Job Description P14294 Confidence 26.58% Date Thu Jan 5 11:33:58 GMT 2012 Rank 134 Aligned Residues 92 % Identity 9% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.					.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		K	D	L	K	K	I	L	R	A	T	D	G	L	G	T	E	A	T	R	A	G	I	I	E	L	L	F	K	R	G	F	L	T	K	K	G	R	.	.	.	.	Y	I	H	S	T	D	A	G	K	A	L	F	H	S	L	P	E	M	A	T	R	P	D	M	T	A	H	W	E	S	V	L	T	Q	I	S	E	K	Q
Query Conservation																																							.	.	.	.
Alig confidence															.																								.	.	.	.
Template Conservation															.
Template Sequence		N	E	I	V	V	E	I	Q	K	Y	K	E	V	.	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y	G	G	D	X	K	S	L	V	L	N	F	A	K	N	E
Template Known Secondary structure										T	T	S			.															T	T	S							T	T								S																			T	T												T	T
Template Predicted Secondary structure															.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	Y	Q	D	F	M	Q	P	L	V	G	T	L	Y	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	N	N	K	E	I	E	E	L	R	D	I	L	N	D	I
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions