Job Description P14294 Confidence 100.00% Date Thu Jan 5 11:33:58 GMT 2012 Rank 7 Aligned Residues 241 % Identity 24% Template d1cy9a_ SCOP info Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	K	D	F	F	E	V	K	A	H	I	V	T	P	A	D	E	R	F	T	A	I	W	Q	P	S	E	A	C	E	P	Y	Q	D	E	E	G	R	L	L	H	R	P	L	A	E	H	V	V	N	R	I	S	G	Q	P	A	I	V	T	S	Y	N	D	K	R	E	S	E	S	A	P	L	P	F	S	L	S
Query Conservation
Alig confidence																											.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		F	V	P	E	E	F	W	E	V	D	A	S	T	T	T	P	S	G	E	A	L	A	L	Q	V	.	.	.	.	.	.	T	H	Q	N	D	K	P	F	R	P	V	N	K	E	Q	T	Q	A	A	V	S	L	L	E	K	A	R	Y	S	V	L	E	R	E	D	K	P	T	T	S	K	P	G	A	P	F	I	T	S
Template Known Secondary structure																	T	T	S								.	.	.	.	.	.				T	T							S														S																				B
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	I	E	A	A	K	R	F	G	L	S	A	Q	N	V	L	D	I	C	Q	K	L	Y	E	T	H	K	L	I	T	Y	P	R	S	D	C	R	Y	L	P	E	E	H	F	A	G	R	H	A	V	M	N	A	I	S	V	H	A	P	D	L	L	P	Q	P	V	V	D	P	D	I	R	N	R	C	W	D	D
Query Conservation
Alig confidence																												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	Q	Q	A	A	S	T	R	L	G	F	G	V	K	K	T	M	M	M	A	Q	R	L	Y	E	.	A	G	Y	I	T	Y	M	R	T	D	S	T	N	L	S	Q	D	A	V	N	M	V	R	G	Y	I	S	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	K	K	Y	L	P	E	S	P
Template Known Secondary structure																												.	T	T	S	B			S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		G	G	G	S		S	S
Template Predicted Secondary structure																												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.															.	.	.	.	.	.	.	350	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		K	K	V	D	A	H	H	A	I	I	P	T	A	R	S	S	A	.	.	.	.	I	N	L	T	E	N	E	A	K	V	Y	N	L	I	A	R	Q	Y	L	M	Q	F	C	P	D	A	V	F	R	K	C	V	I	E	L	D	I	A	K	G	K	F	V	A	K	A	R	F	L	A	E	A	G	W	R	T	L	L	G
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																																											.
Template Conservation																																																																																	.
Template Sequence		N	Q	Y	A	S	H	E	A	I	R	P	S	D	V	N	V	M	A	E	S	L	K	D	M	E	A	D	A	Q	K	L	Y	Q	L	I	W	R	Q	F	V	A	C	Q	M	T	P	A	K	Y	D	S	T	T	L	T	V	G	A	G	D	F	R	L	K	A	R	G	R	I	L	R	F	D	G	W	T	K	V	M	.
Template Known Secondary structure										B		B	S		T	T			G	G	G		T	T	S																			T	S															T	T														G	G	G	G	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	E	R	D	E	E	N	D	G	T	P	L	P	V	V	A	K	G	D	E	L	L	C	E	K	G	E	V	V	E	R	Q	T	Q	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	R	I	L	P	A	V	N	K	G	D	A	L	T	L	V	E	L	T	P	A	Q	H	F	T	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions