Job Description P14294 Confidence 84.95% Date Thu Jan 5 11:33:58 GMT 2012 Rank 52 Aligned Residues 91 % Identity 16% Template c3cjnA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.						.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		R	H	F	T	D	A	T	L	L	S	A	M	T	G	I	A	R	F	V	Q	D	K	D	L	K	K	I	L	R	A	T	D	G	L	G	T	E	A	T	R	A	G	I	I	E	L	L	F	K	R	G	F	L	T	K	K	.	.	.	.	.	G	R	Y	I	H	S	T	D	A	G	K	A	L	F	H	S	L	P	E
Query Conservation																																																										.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.																						.	.	.	.	.																.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.																																										.	.	.	.
Template Sequence		D	G	L	P	I	G	T	L	G	I	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	.	E	Q	S	T	L	S	R	A	L	D	G	L	Q	A	D	G	L	V	R	R	E	V	D	D	Q	R	S	S	R	V	Y	L	T	P	A	G	R	A	V	Y	D	.	.	.	.
Template Known Secondary structure			S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		.															T	T	S									S	S															.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.																																										.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.																					.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	R	P	D	M	T	A	H	W	E	S	V	L	T	Q	I	S	E	K	Q	C	R	Y	Q	D	F	M	Q	P	L	V	G	T	L	Y	Q	L	I	D	Q	A	K	R	T	P	V
Query Conservation
Alig confidence		.	.	.	.	.																	.	.
Template Conservation		.	.	.	.	.																	.	.
Template Sequence		.	.	.	.	.	R	L	W	P	H	X	R	A	S	H	D	R	X	F	Q	G	.	.	I	T	P	Q	E	R	Q	A	F	L	A	T	L	N	K	X	L	A	N	I	R	V	H	E	I
Template Known Secondary structure		.	.	.	.	.														T	T	T	.	.																						S	S
Template Predicted Secondary structure		.	.	.	.	.																	.	.
Template SS confidence
							119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions