Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGJ9
Confidence97.61%DateThu Jan 5 11:29:21 GMT 2012
Rank66Aligned Residues47
% Identity28%Templated2uubd1
SCOP infoAlpha-L RNA-binding motif Alpha-L RNA-binding motif Ribosomal protein S4
Resolution2.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400....
Predicted Secondary structure 

















Query SS confidence 














































Query Sequence  DLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRL
Query Conservation   
  

    
  
  





  


 

   
 
    
      
Alig confidence 














































Template Conservation 


 

 
 

  

  




 

 
 


  
  

  

 

 
Template Sequence  RLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEI
Template Known Secondary structure  BTTSSSSTT
TT


TT
B

TT
Template Predicted Secondary structure 





















Template SS confidence 














































   100.........110.........120.........130.........140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions