Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGJ9
Confidence97.54%DateThu Jan 5 11:29:21 GMT 2012
Rank69Aligned Residues51
% Identity16%Templated1p9ka_
SCOP infoAlpha-L RNA-binding motif Alpha-L RNA-binding motif YbcJ-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360.........370.........380.........390.........400....
Predicted Secondary structure 





















Query SS confidence 


















































Query Sequence  EKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRL
Query Conservation       
  

    
  
  





  


 

   
 
    
      
Alig confidence 


















































Template Conservation     


   

  
   

  

 

  
 
 


  
     

  

 
Template Sequence  HPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTV
Template Known Secondary structure 
S


TS
SSSSTTSTTB



SS



SS
Template Predicted Secondary structure 






















Template SS confidence 


















































   18.20.........30.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions