Job Description P0AGJ9 Confidence 98.69% Date Thu Jan 5 11:29:21 GMT 2012 Rank 43 Aligned Residues 225 % Identity 13% Template d1li5a2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure									.																					.	.	.	.
Query SS confidence									.																					.	.	.	.
Query Sequence		A	Q	G	P	I	A	L	.	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	P	L	L	.	.	.	.	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I
Query Conservation									.																					.	.	.	.
Alig confidence									.										.											.	.	.	.																			.	.
Template Conservation																			.																																	.	.
Template Sequence		H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	.	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	.	.	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E
Template Known Secondary structure		S	T	T										B	S	S	S		.		B																					T									B	.	.	B			S										T	T
Template Predicted Secondary structure																			.																																	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.													.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		R	K	Q	V	A	P	F	L	D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	K	H	.	.	.	.	.	.	.	.	.	.	.	.	F	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L	N	R	E	D	Q	G	I	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence																	.	.	.										.	.													.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																	.	.	.										.	.
Template Sequence		M	H	K	D	F	D	A	L	N	I	L	R	P	D	M	.	.	.	E	P	R	A	T	H	H	I	A	.	.	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	K	R	N	P	M	D	F	V	L	W	K	M
Template Known Secondary structure									T	T					S	B	.	.	.			B	G	G	G				.	.												T	T	S					T	T	S						G	G	G		T	T	T	T	T	T	T	T				S	T	T
Template Predicted Secondary structure																	.	.	.										.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
														169	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	F	T	E	F	S	Y	N	L	.	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	Q	W	.	.	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.										.													.	.												.	.
Template Conservation																																				.	.
Template Sequence		S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	.	.	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	R
Template Known Secondary structure				T	T	S			B			T	T		S					S	S													S	S	.	.							B	G	G	G	T	T	T													S	S	S									B						T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		T	K	F	G	K	T	E	G	G	A	V	W	L	D	P	.	.	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	A
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		E	K	M	S	K	S	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	G	H
Template Known Secondary structure		B				G	G	G	T				B						T	T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions