Job Description P0AGJ9 Confidence 100.00% Date Thu Jan 5 11:29:21 GMT 2012 Rank 37 Aligned Residues 262 % Identity 15% Template c3prhB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis Resolution 2.80 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	A	L	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	P	L	L	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R	K	Q	V	A	P	F	L
Query Conservation
Alig confidence															.																																						.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation															.																																						.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		K	Q	T	I	F	S	G	I	Q	P	S	G	S	.	V	T	L	G	N	Y	I	G	A	M	K	Q	F	V	E	L	Q	H	D	Y	N	S	Y	F	C	I	V	D	Q	H	A	I	T	V	P	Q	D	.	.	.	.	.	.	.	.	.	.	R	L	E	L	R	K	N	I	R	N	L	.	.	.	A	A	L	Y	L
Template Known Secondary structure													S		.		B							T							T	T	T	T	S												T	T	S				.	.	.	.	.	.	.	.	.	.												.	.	.
Template Predicted Secondary structure															.																																						.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	K	H	F	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L	N	R	E	D	Q	G	I	S	F	T	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.
Template Sequence		A	V	G	L	D	P	E	K	A	T	L	F	I	Q	S	E	V	P	A	H	A	Q	A	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	Q	C	V	A	Y	I	G	E	L	E	.	.	.	.	R	M	V	S	G	L	L	T	Y	P	P	L	M	A	A	D	I	L	L	Y	G	T	D	.	.	.
Template Known Secondary structure			T	T			T	T	T	S					G	G	G		T								.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S							.	.	.	.								T											T	T	T			.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.														.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																		.																														.	.
Query SS confidence																											.	.	.	.	.	.																		.																														.	.
Query Sequence		V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	.	.	.	.	.	.	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	.	K	F	G	K	T	E	G	G	A	V	W	L	D	P	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	.	.
Query Conservation																											.	.	.	.	.	.																		.																														.	.
Alig confidence		.																									.	.	.	.	.	.																		.																														.	.
Template Conservation		.
Template Sequence		.	L	V	P	P	G	E	D	Q	K	Q	H	L	E	L	T	R	N	L	A	E	R	F	N	K	K	Y	N	D	I	F	T	I	P	E	V	K	I	A	R	I	M	S	L	N	D	P	L	K	K	M	S	K	S	D	P	N	Q	K	A	Y	I	T	L	L	D	E	P	K	Q	L	E	K	K	I	K	S	A	V	T
Template Known Secondary structure		.						T	T																			T															B		S	S		T	T	S	B			T	T		S	S	T	T	S			B	T	T												T	S
Template Predicted Secondary structure		.
Template SS confidence
			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
													264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	S	I	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	R	A	Q	Y	V	L	A	E	Q	V	T	R	L	V	H	G	.	.	.	.	E	E	G	L	Q	A	A	K	R	I	T	E	C	L	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																	.																		.	.	.	.
Template Conservation																																													.
Template Sequence		D	S	E	G	I	V	K	F	D	K	E	N	K	P	G	V	S	N	L	L	T	I	Y	S	I	L	G	N	T	T	I	E	E	L	E	A	K	Y	E	G	K	G	Y	.	G	E	F	K	G	D	L	A	E	V	V	V	N	A	L	K	P	I	Q	D	R	Y	Y	E	L	I	E	S	E	E	L	D	R	I	L	D
Template Known Secondary structure			S	S							T	T	T	S															T	S									T	T	T				.																												S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		329	330
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		303	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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