Job Description P0AGJ9 Confidence 100.00% Date Thu Jan 5 11:29:21 GMT 2012 Rank 22 Aligned Residues 288 % Identity 16% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																						.
Query SS confidence																																		.																						.
Query Sequence		M	A	S	S	N	L	I	K	Q	L	Q	E	R	G	L	V	A	Q	V	T	D	E	E	A	L	A	E	R	L	A	Q	G	.	P	I	A	L	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	.	P	L	L	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L
Query Conservation																																		.																						.
Alig confidence										.							.																	.														.								.
Template Conservation										.							.																															.
Template Sequence		M	N	T	D	E	R	Y	K	.	L	L	R	S	V	G	.	E	E	C	I	Q	E	S	E	L	R	N	L	I	E	K	K	P	L	I	R	C	Y	D	G	F	E	P	S	G	R	.	M	H	I	A	Q	G	I	F	K	A	V	N	V	N	K	C	T	A	A	G	C	E	F	V	F	W	V	A	D	W	F	A	L
Template Known Secondary structure										.					T		.	S	S		S													S	S											S	S	.		B																		T
Template Predicted Secondary structure										.							.																															.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		I	G	D	P	S	F	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R	K	Q	V	A	P	F	L	D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	.	.	V	L	T	F	L	R	D	I	G	K	H	F	S	V	N	Q	M	I	N	K	E	A
Query Conservation																																																										.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	D	K	V	G	G	E	L	E	K	I	R	I	V	G	R	Y	L	I	E	V	.	.	.	.	.	.	.	.	.	.	W	K	A	A	G	M	D	M	D	K	V	L	F	L	W	S	S	E	E	I	T	S	H	A	D	T	Y	W	R	M	V	L	D	I	G	R	Q	N	T	I	A	R	I	K	K	C	C	T
Template Known Secondary structure				T		S	T	T																.	.	.	.	.	.	.	.	.	.					T			G	G	G												T	T														T	S							T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																.																.	.
Query SS confidence																																																																.																.	.
Query Sequence		V	K	Q	R	L	N	R	E	D	Q	G	I	S	F	T	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	.	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	.	.
Query Conservation																																																																.																.	.
Alig confidence								.	.	.																									.	.	.	.																										.																.	.
Template Conservation								.	.	.																									.	.	.	.
Template Sequence		I	M	G	K	T	E	.	.	.	G	T	L	T	A	A	Q	V	L	Y	P	L	M	Q	C	C	D	I	F	F	L	K	A	D	.	.	.	.	I	C	Q	L	G	L	D	Q	R	K	V	N	M	L	A	R	E	Y	C	D	L	I	G	R	K	L	K	P	V	I	L	S	H	H	M	L	A	G	L	K	Q	G	Q
Template Known Secondary structure				T	S			.	.	.	S	S			S	S		S													T	T		S	.	.	.	.					B	G	G	G															T										B						S	S	T	T
Template Predicted Secondary structure								.	.	.																									.	.	.	.
Template SS confidence
		148	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		234	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																							.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure								.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	F	G	K	T	.	E	G	G	A	V	W	L	D	P	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	S	I	.	.	.	.	.	.	.	.	.	.
Query Conservation								.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence								.								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		A	K	M	S	K	S	D	P	D	S	A	I	F	M	.	.	.	E	D	T	E	E	D	V	A	R	K	I	R	Q	A	Y	C	P	R	V	K	Q	S	A	S	A	I	T	D	D	G	A	P	V	A	T	D	D	R	N	P	V	L	D	Y	F	Q	C	V	V	Y	A	R	P	G	A	A	A	T	I	D	G	T	T
Template Known Secondary structure		S	S			S	S		G	G	G	S		B	T	.	.	.	T												T					S	S									S	S							T	T												T	S	S	S	T	T					S	S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
			281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.																			.
Query SS confidence		.																			.
Query Sequence		.	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	R	.	A	Q	Y	V	L	A	E	Q	V	T	R	L	V
Query Conservation		.																			.
Alig confidence		.																			.
Template Conservation
Template Sequence		Y	A	T	Y	E	D	L	E	Q	A	F	V	S	D	E	V	S	E	D	A	L	K	S	C	L	I	D	E	V	N	A	L	L
Template Known Secondary structure			S	S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions