Job Description P0AGJ9 Confidence 92.33% Date Thu Jan 5 11:29:21 GMT 2012 Rank 98 Aligned Residues 65 % Identity 15% Template c3izbD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein rps4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		358	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.						.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure								.																																										.	.	.	.	.
Query SS confidence								.																																										.	.	.	.	.
Query Sequence		D	L	M	Q	A	L	.	V	D	S	E	L	Q	P	S	R	G	Q	A	R	K	T	I	A	S	N	A	I	T	I	N	G	E	K	Q	S	D	P	E	Y	F	F	K	E	E	D	R	L	.	.	.	.	.	F	G	R	F	T	L	L	R	R	G	K	K	N	Y	C	L	I	C
Query Conservation								.																																										.	.	.	.	.
Alig confidence								.																																										.	.	.	.	.
Template Conservation
Template Sequence		P	L	I	V	F	L	R	N	R	L	K	Y	A	L	N	G	R	E	V	K	A	I	L	M	Q	R	H	V	K	V	D	G	K	V	R	T	D	T	T	Y	P	A	G	F	M	D	V	I	T	L	D	A	T	N	E	N	F	R	L	V	Y	D	V	K	G	R	F	A	V	H	R
Template Known Secondary structure													S				S	S	T	T						T	T					T	T						T	T					T	T							S	S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions