Job Description P0AGJ9 Confidence 100.00% Date Thu Jan 5 11:29:21 GMT 2012 Rank 26 Aligned Residues 299 % Identity 16% Template c3hv0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase from cryptosporidium parvum Resolution 2.42 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																									.																																	.
Query SS confidence																									.																																	.
Query Sequence		L	Q	E	R	G	L	V	A	Q	V	T	D	E	E	A	L	A	E	R	L	A	Q	G	.	P	I	A	L	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	P	L	L	C	L	K	R	F	Q	Q	A	.	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	K	A	A
Query Conservation																									.																																	.
Alig confidence																									.																																	.																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		F	F	R	R	N	I	F	L	S	H	R	D	F	E	K	I	L	D	V	Y	E	K	G	E	L	F	Y	L	Y	T	G	R	G	P	S	S	E	S	L	H	V	G	H	L	V	P	F	L	F	T	K	Y	L	Q	D	T	F	K	V	P	L	V	I	Q	L	T	D	D	E	K	F	I	F	K	S	N	L	.	.	.
Template Known Secondary structure					T	T	S						S										T	T												S	S	S	S		B	S	T	T																																T	T		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R	K	Q	V	A	P	F	L	D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	K	H	F	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L	N	R	E	D	Q	G
Query Conservation
Alig confidence		.	.	.	.	.													.	.	.																									.	.																									.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.													.	.	.																									.	.																									.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	T	L	E	E	T	H	N	Y	A	Y	E	N	.	.	.	M	K	D	I	I	A	C	G	F	D	P	E	L	T	F	I	F	T	N	L	E	Y	I	A	.	.	E	L	Y	P	D	I	L	R	I	E	K	K	I	S	C	S	Q	I	K	S	I	F	G	F	.	.	.	.	.	.	.	K	D	S
Template Known Secondary structure		.	.	.	.	.													.	.	.						T	T				T	T	T												.	.													S												.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.	.	.	.	.													.	.	.																									.	.																									.	.	.	.	.	.	.
Template SS confidence
							327	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.								.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		I	S	F	T	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	.	.	.	.	.	.	.	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	K	F	G	K	T	E
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	V	G	K	F	A	F	P	A	V	Q	A	A	P	A	F	S	S	S	F	P	H	I	F	G	G	R	T	D	I	H	C	L	V	P	H	A	I	D	Q	D	P	Y	F	R	M	V	R	D	V	A	P	R	L	G	Y	L	K	P	S	S	I	H	S	I	F	L	P	S	N	S	S	I	F	V	N	D	N	E
Template Known Secondary structure		S													G	G	G	S	G	G	G						T	T		S										G	G	G											T	G	G	G	T																			B	T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		241	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.
Predicted Secondary structure							.	.																																																					.																	.
Query SS confidence							.	.																																																					.																	.
Query Sequence		G	G	A	V	W	.	.	L	D	P	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	S	I	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	.	R	A	Q	Y	V	L	A	E	Q	V	T	R	L	V	H	G	.	E	E	G
Query Conservation							.	.																																																					.																	.
Alig confidence							.	.																																																					.																	.
Template Conservation
Template Sequence		E	S	I	R	N	K	I	M	K	Y	A	F	S	G	G	Q	A	T	E	E	E	Q	G	A	N	L	D	V	D	V	S	W	Q	Y	L	R	F	L	M	E	D	D	E	K	L	E	E	I	G	K	K	Y	S	S	G	E	M	L	S	G	E	I	K	S	I	L	V	Q	E	L	V	K	L	T	K	N	H	Q	K	N
Template Known Secondary structure												S				S		S	S	S							T	T	T																											T	S	S
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		317	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	A	K	R	I	T	E	C	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	A	I	N	D	D	V	I	A	K	F
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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