Job Description P0AGJ9 Confidence 98.55% Date Thu Jan 5 11:29:21 GMT 2012 Rank 47 Aligned Residues 288 % Identity 17% Template c3c8zB_ PDB info PDB header:ligase Chain: B: PDB Molecule:cysteinyl-trna synthetase; PDBTitle: the 1.6 a crystal structure of mshc: the rate limiting2 enzyme in the mycothiol biosynthetic pathway Resolution 1.60 Å

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		31	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure									.																				.	.	.	.
Query SS confidence									.																				.	.	.	.
Query Sequence		Q	G	P	I	A	L	Y	.	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	P	L	L	.	.	.	.	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R
Query Conservation									.																				.	.	.	.
Alig confidence									.									.											.	.	.	.																			.	.
Template Conservation																		.																																	.	.
Template Sequence		G	P	T	A	T	M	Y	V	C	G	I	T	P	Y	D	A	.	T	H	L	G	H	A	A	T	Y	L	T	F	D	L	V	H	R	L	W	L	D	A	G	H	T	V	Q	Y	V	Q	N	V	.	.	T	D	V	D	D	P	L	F	E	R	A	E	R	D	G	I	D	W	R	T	L	G	D	R	E	T	Q	L	F
Template Known Secondary structure			S	S										T	T	S		.		B																				T	T										.	.			S												T
Template Predicted Secondary structure																		.																																	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		106	.	.	.	110	.	.	.	.	.	.	.																							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		K	Q	V	A	P	F	L	D	F	D	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	.	.	K	H	F	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		R	E	D	M	A	A	L	R	V	L	P	P	H	D	Y	V	A	A	T	D	A	I	A	E	V	V	E	M	V	E	K	L	L	A	S	G	A	A	Y	I	V	E	D	A	E	Y	P	D	V	Y	F	R	A	D	A	T	A	Q	F	G	Y	E	S	G	Y	D	R	D	T	M	L	T	L	F	A	E	R	G	G	D
Template Known Secondary structure								T	T					S					G	G	G																T	S					S		S	S	S							T	T	S	S	T	T	T	T	T	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		162	.	.	.	.	.	.	.	170	.																													.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		N	R	E	D	Q	G	I	S	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	.	.	.	.	Q	W	G	N	I	T	S	G	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		P	D	R	P	G	K	S	D	Q	L	D	A	L	L	W	R	A	E	R	P	G	E	P	S	W	P	S	P	F	G	R	G	R	P	G	W	H	V	E	C	S	A	I	A	L	T	R	I	.	.	.	.	.	.	.	G	T	G	L	D	I	Q	G	G	G	S	D	L	I	F	P	H	H	E	Y	S	A	A	H	A
Template Known Secondary structure		T	T		T	T		S	S	T	T										T	T	S			B			T	T		S																	T	.	.	.	.	.	.	.		T	T								G	G	G	T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.																																		.	.	.	.	.
Query SS confidence																																							.	.	.	.	.																																		.	.	.	.	.
Query Sequence		D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	K	F	G	K	T	E	G	G	A	V	W	L	.	.	.	.	.	D	P	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	S	.	.	.	.	.
Query Conservation																																							.	.	.	.	.																																		.	.	.	.	.
Alig confidence																					.																		.	.	.	.	.																																		.	.	.	.	.
Template Conservation																					.
Template Sequence		E	S	V	T	G	E	R	R	F	A	R	H	Y	V	H	T	G	M	I	.	G	V	L	V	S	Q	L	R	A	Q	G	V	D	P	S	A	I	R	L	G	L	F	S	G	H	Y	R	E	D	R	F	W	S	N	E	V	L	D	E	A	N	A	R	L	A	R	W	R	S	A	T	A	L	P	E	A	P	D	A	T
Template Known Secondary structure								S		S		S								B	.			B							T	T												T	S		T	T	S		B																						T	S	S	S	B	S
Template Predicted Secondary structure																					.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																	.
Query SS confidence		.	.																																	.
Query Sequence		.	.	I	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	R	A	Q	Y	V	L	A	E	Q	V	T	R	L	V	.	H	G	E	E	G	L	Q	A	A	K	R	I	T	E	C	L	F	S
Query Conservation		.	.																																	.
Alig confidence		.	.																																	.
Template Conservation
Template Sequence		D	V	I	A	R	V	R	Q	Y	L	A	D	D	L	D	T	P	K	A	L	A	A	L	D	G	W	C	T	D	A	L	S	Y	G	G	H	D	T	E	S	P	R	L	V	A	T	T	V	D	A	L	L	G
Template Known Secondary structure													B	T																							S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions