Job Description P0AGJ9 Confidence 97.22% Date Thu Jan 5 11:29:21 GMT 2012 Rank 77 Aligned Residues 89 % Identity 13% Template c2xzmD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	G	L	Q	A	A	K	R	I	T	E	C	L	F	S	G	S	L	S	A	L	S	E	A	D	F	E	Q	L	A	Q	D	G	V	P	M	V	E	M	E	K	G	A	D	L	M	Q	A	L	V	D	S	E	L	Q	P	S	R	G	Q	A	R	K	T	I	A	S	N	A	I	T	I	N	G	E	K	Q	S
Query Conservation
Alig confidence																																													.	.	.
Template Conservation																																													.	.	.
Template Sequence		D	P	R	R	L	F	E	G	S	A	L	L	R	R	M	F	K	Y	G	L	L	S	E	Q	E	R	K	L	D	Y	V	L	G	L	T	I	H	K	L	M	E	R	R	.	.	.	L	Q	T	R	V	F	K	L	N	L	A	N	S	I	H	H	S	R	V	L	I	R	Q	R	H	I	K	V	G	K	N	L	V	N
Template Known Secondary structure																			T	T	S	S		T	T			S	T					S								T	T	B	.	.	.								T	T		S	S	S	T	T						T	T	T	T					T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		393	.	.	.	.	.	.	400	.			.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		D	P	E	Y	F	F	K	E	E	.	.	D	R	L
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		V	P	S	F	M	V	R	T	D	S	E	K	S	I
Template Known Secondary structure			S			B			S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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