Job Description P0AGJ9 Confidence 98.75% Date Thu Jan 5 11:29:21 GMT 2012 Rank 42 Aligned Residues 207 % Identity 14% Template c2x1lC_ PDB info PDB header:ligase Chain: C: PDB Molecule:methionyl-trna synthetase; PDBTitle: crystal structure of mycobacterium smegmatis methionyl-trna2 synthetase in complex with methionine and adenosine Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.																	.	.	.	.																													.	.	.	.	.
Query SS confidence												.																	.	.	.	.																													.	.	.	.	.
Query Sequence		Q	G	P	I	A	L	Y	C	G	F	.	D	P	T	A	D	S	L	H	L	G	H	L	V	P	L	L	.	.	.	.	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	.	.	.	.	.	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W
Query Conservation												.																	.	.	.	.																													.	.	.	.	.
Alig confidence												.						.											.	.	.	.																			.	.	.	.	.	.					.	.	.	.	.
Template Conservation																		.																																	.	.	.	.	.	.
Template Sequence		S	E	P	F	Y	I	T	T	A	I	A	Y	P	N	G	V	.	P	H	I	G	H	A	Y	E	Y	I	A	T	D	A	I	A	R	F	K	R	L	D	G	Y	D	V	R	Y	L	T	G	T	.	.	.	.	.	.	D	V	H	G	Q	K	M	A	E	T	A	A	K	E	G	I	P	A	A	E	L	A	R	R	N
Template Known Secondary structure												B			S	S		.																						T	T										.	.	.	.	.	.				S											T
Template Predicted Secondary structure																		.																																	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		101	.	.	.	.	.	.	.																											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Query Sequence		V	D	K	I	R	K	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	F	L	D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	K	H	F	S	V	N	.	.	Q	M	I
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation
Template Sequence		S	D	V	F	Q	R	L	Q	E	K	L	N	I	S	F	D	R	F	I	R	T	S	D	A	D	H	Y	E	A	S	K	A	I	W	K	R	M	A	D	A	G	D	I	Y	L	D	A	Y	T	E	E	Q	T	Y	F	F	R	L	S	A	Y	T	D	R	L	L	A	L	Y	E	E	H	P	E	F	I	G	P	D	A
Template Known Secondary structure												T	T				S					T	T	S																	T	T																	G	G	G	S												G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																															170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	E	A	V	K	Q	R	L	N	R	E	D	Q	G	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	Q	W
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		R	R	N	E	I	V	S	F	V	S	G	G	L	K	D	L	S	I	S	R	T	T	F	D	W	G	V	P	V	P	D	H	P	D	H	V	M	Y	V	W	V	D	A	L	T	N	Y	L	T	G	V	G	F	P	D	T	E	S	E	S	F	R	R	Y	.	.	.	W	P	A	D	L	H	M	I	G	K	D	I	I
Template Known Secondary structure											T	T										S	S				S				T	T														T					T	T	T	T	T		T	T	S							.	.	.		S		S						G	G	G
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.
		203		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	K	F	G	K	T	E	G	G	A	V	W	L	D
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		R	F	H	T	V	Y	W	P	A	F	L	M	S	A	G	L	P	L	P	K	R	I	F	A	H	G	W	L	L	N	R	G	E	K	M	S	K	S	I	G	N	V	V	D	P	V
Template Known Secondary structure						T										T					S												S		S			T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions