Job Description P0AGJ9 Confidence 97.09% Date Thu Jan 5 11:29:21 GMT 2012 Rank 78 Aligned Residues 204 % Identity 11% Template c2o5rA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase 1; PDBTitle: crystal structure of glutamyl-trna synthetase 1 (ec 6.1.1.17)2 (glutamate-trna ligase 1) (glurs 1) (tm1351) from thermotoga maritima3 at 2.5 a resolution Resolution 2.34 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	K	F	G	K	T	E	G	G	.	.	A	V	W	L	D	P	K	K	T
Query Conservation																																																																							.	.
Alig confidence																		.	.	.	.																																																		.	.
Template Conservation																		.	.	.	.
Template Sequence		T	Y	N	F	A	C	V	V	D	D	X	L	X	E	I	T	.	.	.	.	H	V	I	R	G	D	D	H	L	S	N	T	L	R	Q	L	A	L	Y	E	A	F	E	K	A	P	P	V	F	A	H	V	S	T	I	L	G	P	D	G	K	K	L	S	K	R	H	G	A	T	S	V	E	A	F	R	D	X	G	Y
Template Known Secondary structure														T	T		S	.	.	.	.						G	G	G														T	T															T	T	S	S	B			G	G	G	S			B								T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.												.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		S	P	Y	K	F	Y	Q	F	W	I	N	.	.	.	.	.	.	.	.	.	.	.	T	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	.	.	.	.	.	.	S	I	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	R	A	Q	Y	V	L	A	E	Q	V	T	R	L	V	H	G	E
Query Conservation													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	E	A	L	V	N	Y	L	A	L	L	G	W	S	H	P	E	G	K	E	L	L	T	L	E	E	L	I	S	S	F	S	L	D	R	L	S	P	N	P	A	I	F	D	P	Q	K	L	K	W	X	N	G	Y	Y	L	R	N	X	P	I	E	K	L	A	E	L	A	K	P	F	F	E	K	A	G	I	K	I
Template Known Secondary structure												T	S	S	B			T	T																G	G	G	B		S	S																				S																T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		E	G	L	Q	A	A	K	R	I	T	E	C	L	F	S	G	S	L	S	A	L	S	E	A	D	F	E	Q	L	A	Q	D	G	V	P	M	V	E	M	E	K	G	A	D	L	M	Q	A	L	V	D	S	E	L	Q	P	.	.	.	S	R	G	Q	A	R	K	T	I	A	S
Query Conservation																																																										.	.	.
Alig confidence																																																										.	.	.
Template Conservation
Template Sequence		I	D	E	E	Y	F	K	K	V	L	E	I	T	K	E	R	V	E	V	L	S	E	F	P	E	E	S	R	F	F	F	E	D	P	A	P	V	E	I	P	E	E	X	K	E	V	F	S	Q	L	K	E	E	L	Q	N	V	R	W	T	X	E	E	I	T	P	V	F	K	K
Template Known Secondary structure															T	T	T		S	S	G	G	G					S	G	G	G	T	S									G	G	G											T	T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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