Job Description P0AGJ9 Confidence 95.60% Date Thu Jan 5 11:29:21 GMT 2012 Rank 91 Aligned Residues 207 % Identity 18% Template c2hz7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		M	A	S	S	N	L	I	K	Q	L	Q	E	R	G	L	V	A	Q	V	T	D	E	E	A	L	A	E	R	L	A	Q	G	P	I	A	L	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	P	.	L	L	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I
Query Conservation																																																								.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.															.									.																					.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.															.																														.	.	.	.
Template Sequence		L	V	A	P	N	F	I	T	E	I	I	E	R	D	L	E	A	G	K	Y	.	.	.	.	.	.	.	.	.	.	.	P	R	V	V	T	R	F	P	P	D	P	S	G	Y	.	A	H	L	G	H	V	F	A	S	L	L	D	F	N	T	A	R	Q	Y	G	G	Q	F	N	L	R	M	D	D	.	.	.	.	T
Template Known Secondary structure		S	S															T	T	S		.	.	.	.	.	.	.	.	.	.	.	S	S									S	S	S		.		B																	T	T										.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.															.																														.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																						.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	P	S	F	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R	K	Q	V	A	P	F	L	D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	.	N	M	N	V	L	T	F	L	R	D	I	G	K	H	F	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		N	P	E	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	Y	V	D	S	I	A	D	D	L	K	W	L	G	L	D	W	G	E	.	H	F	Y	Y	A	S	D	Y	F	D	R	Y	Y	A	Y	A	E	Q	L	I	R	Q	G	D	A	Y	V	E	S	V	S	P	E	E	L	S	R	L
Template Known Secondary structure			T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T				T	T	.					G	G	G	G														T	T	S						S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		110	.	.	.	.	.																.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
												147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																				.	.	.	.	.	.	170	.	.	.	.																.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	Q	G	I	S	F	T	E	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	L	L	Q	G	Y	D
Query Conservation		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	N	A	T	T	P	G	T	P	S	P	Y	R	D	R	S	V	E	E	N	L	D	L	L	R	R	M	K	A	G	E	F	A	D	G	E	H	V	L	R	A	K	I	D	L	T	A	P	N	M	K	L	R	D	P	V	L	Y	R	I	V	N	K	P	H	F	R	T	S	D	E	W	H	I	Y	P	A	Y	D
Template Known Secondary structure				B	T	T	B						T	T	T	T															T	T		S		T	T	S									T	T		S	S	G	G	G	S	S											B	T	T	T	B	T	S		S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		183	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		F	A	C	L	N	K	Q	Y	.	.	G	V	V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	K	F	G	K	T
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		F	E	H	P	L	Q	D	A	I	E	G	V	T	H	S	M	C	S	L	E	F	V	D	N	R	A	I	Y	D	W	L	M	E	K	L	N	F	D	P	R	P	H	Q	Y	E	F	G	R	R	G	L	E	Y	T	I	T	S	K	R
Template Known Secondary structure												T		S						G	G	G	T	T	T											T	T		S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions