Job Description P0AGJ9 Confidence 100.00% Date Thu Jan 5 11:29:21 GMT 2012 Rank 36 Aligned Residues 264 % Identity 20% Template c2g36A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase (ec 6.1.1.2)2 (tryptophan-trna ligase)(trprs) (tm0492) from thermotoga maritima at3 2.50 a resolution Resolution 2.50 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	A	L	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	.	P	L	L	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	K	A	A	E	R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R	K	Q	V	A	P	F	L
Query Conservation																						.
Alig confidence														.								.																															.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation														.																																							.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		M	R	I	L	S	G	M	R	P	T	G	K	.	L	H	I	G	H	L	V	G	A	L	E	N	W	V	K	L	Q	E	E	G	N	E	C	F	Y	F	V	A	D	W	H	A	L	T	T	H	Y	D	.	.	.	.	.	.	.	.	.	D	V	S	K	L	K	E	Y	T	R	D	L	.	.	.	V	R	G	F	L
Template Known Secondary structure												S	S	.		B						T											T	T																	T	T	.	.	.	.	.	.	.	.	.			T	T									.	.	.
Template Predicted Secondary structure														.																																							.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	K	H	F	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L	N	R	E	D	Q	G	I	S	F	T	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V
Query Conservation
Alig confidence																													.	.	.																			.	.	.	.	.																									.	.	.
Template Conservation																													.	.	.																			.	.	.	.	.																									.	.	.
Template Sequence		A	C	G	I	D	P	E	K	S	V	I	F	V	Q	S	G	V	K	E	H	A	E	L	A	L	L	F	.	.	.	S	M	I	V	S	V	S	R	L	E	R	V	P	T	Y	K	E	I	.	.	.	.	.	D	L	S	T	A	G	F	L	I	Y	P	V	L	Q	A	A	D	I	L	I	Y	K	A	E	.	.	.
Template Known Secondary structure			T	T			T	T	T	S					G	G	G		T										.	.	.		T	T	S							T						T		.	.	.	.	.				S					T											T	T	T		S	.	.	.
Template Predicted Secondary structure																													.	.	.																			.	.	.	.	.																									.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																																																.
Query SS confidence																										.	.	.	.	.	.	.	.																																																.
Query Sequence		V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	.	.	.	.	.	.	.	.	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	K	F	G	K	T	E	G	G	A	V	W	L	D	P	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	.
Query Conservation																										.	.	.	.	.	.	.	.																																																.
Alig confidence		.																								.	.	.	.	.	.	.	.																															.	.	.															.
Template Conservation		.																																																														.	.	.
Template Sequence		.	G	V	P	V	G	E	D	Q	V	Y	H	I	E	L	T	R	E	I	A	R	R	F	N	Y	L	Y	D	E	V	F	P	E	P	E	A	I	L	S	R	V	P	K	L	P	G	T	D	G	R	K	M	S	K	S	Y	G	N	I	I	N	L	.	.	.	E	I	S	E	K	E	L	E	Q	T	I	L	R	M	M
Template Known Secondary structure		.						G	G	G																		S														S						T	T	S	S				G	G	G	T				B	T	.	.	.	T												T
Template Predicted Secondary structure		.																																																														.	.	.
Template SS confidence
			144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
																264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	S	I	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	R	A	Q	Y	V	L	A	E	Q	V	T	R	L	V	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	P	A	R	V	R	R	S	D	P	G	N	P	E	N	C	P	V	W	K	Y	H	Q	A	F	D	I	S	E	E	E	S	K	W	V	W	E	G	C	T	T	A	S	I	G	C	V	D	C	K	K	L	L	L	K	N	M	K	R	K	L	A	P	I	W	E	N	F	R	K	I	D	E	D	P	H	Y	V	D
Template Known Secondary structure				T	T		S	S	T	T	S				G	G	G										T	T															T	T		S																														S	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
					314	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	E	G	L	Q	A	A	K	R	I	T	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		D	V	I	M	E	G	T	K	K	A	R	E	V	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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