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Job DescriptionP0AGJ9
Confidence100.00%DateThu Jan 5 11:29:21 GMT 2012
Rank19Aligned Residues287
% Identity17%Templatec1q11A_
PDB info PDB header:ligaseChain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of an active fragment of human tyrosyl-trna2 synthetase with tyrosinol
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  QLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAE
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Template Sequence  HLITRNL. QEVLGEEKLKEILKERELKIYWGTATTGK. PHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKA. . . .
Template Known Secondary structure  TT
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BGGGTT
TT
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   12...... .20.........30.........40....... ..50.........60.........70.........80.....
 
   8990.........100.........110.. .......120.........130.........140.........150.........160.......
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Query Sequence  RKLNTEETVQEWVDKIRKQVAPFL. DFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQG
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Template Sequence  . . . . PWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVK. . . QVEH
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TT


TT
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TTTTS
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   86...90.........100.........110.........120.........130.........140.........150.... ....
 
   168.170.........180.........190.........200.........210.........220.........230.... .
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Query Sequence  ISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGT. . . . . . . . . . . . K
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Template Sequence  PLLSGLLYPGLQALDEEYLKVD. . . . AQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGKIDLLDRKEDVKKK
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TT
S....GGGTGGGT








TT


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   159160.........170.........180 .........190.........200.........210.........220.........230....
 
   236...240.........250.........260.........270.........280.........290....... ..300.........310..
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Query Sequence  FGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAP. RAQYVLAEQVTRLVH
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Template Sequence  LKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSVEVALNKLLD
Template Known Secondary structure  TSSS

TT

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   245....250.........260.........270.........280.........290.........300.........310.........320..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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