Job Description P0AGJ9 Confidence 100.00% Date Thu Jan 5 11:29:21 GMT 2012 Rank 19 Aligned Residues 287 % Identity 17% Template c1q11A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of an active fragment of human tyrosyl-trna2 synthetase with tyrosinol Resolution 1.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Q	E	R	G	L	V	A	Q	V	T	D	E	E	A	L	A	E	R	L	A	Q	G	P	I	A	L	Y	C	G	F	D	P	T	A	D	S	L	H	L	G	H	L	V	P	L	L	C	L	K	R	F	Q	Q	A	G	H	K	P	V	A	L	V	G	G	A	T	G	L	I	G	D	P	S	F	K	A	A	E
Query Conservation
Alig confidence									.																														.																																							.	.	.	.
Template Conservation									.																														.																																							.	.	.	.
Template Sequence		H	L	I	T	R	N	L	.	Q	E	V	L	G	E	E	K	L	K	E	I	L	K	E	R	E	L	K	I	Y	W	G	T	A	T	T	G	K	.	P	H	V	A	Y	F	V	P	M	S	K	I	A	D	F	L	K	A	G	C	E	V	T	I	L	F	A	D	L	H	A	Y	L	D	N	M	K	A	.	.	.	.
Template Known Secondary structure						T	T		.	S															S										S		S		.		B	G	G	G													T	T															T	T		S	S	.	.	.	.
Template Predicted Secondary structure									.																														.																																							.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		R	K	L	N	T	E	E	T	V	Q	E	W	V	D	K	I	R	K	Q	V	A	P	F	L	.	D	F	D	C	G	E	N	S	A	I	A	A	N	N	Y	D	W	F	G	N	M	N	V	L	T	F	L	R	D	I	G	K	H	F	S	V	N	Q	M	I	N	K	E	A	V	K	Q	R	L	N	R	E	D	Q	G
Query Conservation																										.
Alig confidence		.	.	.	.																					.																																																	.	.	.
Template Conservation		.	.	.	.																																																																						.	.	.
Template Sequence		.	.	.	.	P	W	E	L	L	E	L	R	V	S	Y	Y	E	N	V	I	K	A	M	L	E	S	I	G	V	P	L	E	K	L	K	F	I	K	G	T	D	Y	Q	L	S	K	E	Y	T	L	D	V	Y	R	L	S	S	V	V	T	Q	H	D	S	K	K	A	G	A	E	V	V	K	.	.	.	Q	V	E	H
Template Known Secondary structure		.	.	.	.																							T	T				T	T						G	G	G	T	T	T	S												T	T	S									T	T	T	T	S		.	.	.			S	S
Template Predicted Secondary structure		.	.	.	.																																																																						.	.	.
Template SS confidence
						86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.													.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	F	T	E	F	S	Y	N	L	L	Q	G	Y	D	F	A	C	L	N	K	Q	Y	G	V	V	L	Q	I	G	G	S	D	Q	W	G	N	I	T	S	G	I	D	L	T	R	R	L	H	Q	N	Q	V	F	G	L	T	V	P	L	I	T	K	A	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	K
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		P	L	L	S	G	L	L	Y	P	G	L	Q	A	L	D	E	E	Y	L	K	V	D	.	.	.	.	A	Q	F	G	G	I	D	Q	R	K	I	F	T	F	A	E	K	Y	L	P	A	L	G	Y	S	K	R	V	H	L	M	N	P	M	V	P	G	L	T	G	K	I	D	L	L	D	R	K	E	D	V	K	K	K
Template Known Secondary structure																				T	T		S	.	.	.	.						G	G	G											T	G	G	G	T															T	T				B	T	T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		F	G	K	T	E	G	G	A	V	W	L	D	P	K	K	T	S	P	Y	K	F	Y	Q	F	W	I	N	T	A	D	A	D	V	Y	R	F	L	K	F	F	T	F	M	S	I	E	E	I	N	A	L	E	E	E	D	K	N	S	G	K	A	P	.	R	A	Q	Y	V	L	A	E	Q	V	T	R	L	V	H
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		L	K	K	A	F	C	E	P	G	N	V	E	N	N	G	V	L	S	F	I	K	H	V	L	F	P	L	K	S	E	F	V	I	L	R	D	E	K	W	G	G	N	K	T	Y	T	A	Y	V	D	L	E	K	D	F	A	A	E	V	V	H	P	G	D	L	K	N	S	V	E	V	A	L	N	K	L	L	D
Template Known Secondary structure			T	S	S	S			T	T			S	S										T						S	S							G	G	G	T						S	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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