 |
Job Description | P0AGJ9 | Confidence | 96.44% | Date | Thu Jan 5 11:29:21 GMT 2012 |
Rank | 82 | Aligned Residues | 69 |
% Identity | 19% | Template | c1kskA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; |
PDBTitle: structure of rsua
|
Resolution | 2.00 Å |
|
 |
  |   |
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | A | D | L | M | Q | A | L | V | D | S | E | L | Q | P | S | R | G | Q | A | R | K | T | I | A | S | N | A | I | T | I | N | G | E | K | Q | S | D | P | E | Y | F | F | K | E | E | D | R | L | F | G | R | F | T | L | L | R | R | G | K | K | N | Y | C | L | I | C | W | K |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |
|
|   |   |   | . |   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
S | H | X | R | L | D | K | F | I | A | Q | Q | L | . |
G | V | S | R | A | I | A | G | R | E | I | R | G | N | R | V | T | V | D | G | E | I | V | R | N | A | A | F | K | L | L | P | E | H | D | V | A | Y | D | G | N | P | L | A | Q | Q | H | G | P | R | Y | F | X | L | N | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | . | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  | T | T |  |  |
|
|
| T | T |
|  |  |
| T | T |
|
|  |  |  | T | T |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|