Return to main results Retrieve Phyre Job Id

Job DescriptionP39405
Confidence4.56%DateThu Jan 5 12:00:41 GMT 2012
Rank76Aligned Residues21
% Identity14%Templated1ewfa2
SCOP infoAha1/BPI domain-like Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.. .......260..
Predicted Secondary structure 







.









Query SS confidence 










.









Query Sequence  RTCCQRYRLPD. VQQCGDCTLK
Query Conservation 




 
 


.   

 


 
Alig confidence 










.









Template Conservation 

     


 
   


  
 
Template Sequence  TTKFFGTFLPEVAKKFPNMKIQ
Template Known Secondary structure  BTTSSSSTT
B
Template Predicted Secondary structure 



Template SS confidence 





















   294.....300.........310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions