Return to main results Retrieve Phyre Job Id

Job DescriptionP39405
Confidence10.27%DateThu Jan 5 12:00:41 GMT 2012
Rank19Aligned Residues16
% Identity25%Templatec3gj4D_
PDB info PDB header:transport proteinChain: D: PDB Molecule:nuclear pore complex protein nup153; PDBTitle: crystal structure of human rangdp-nup153znf3 complex
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........
Predicted Secondary structure 













Query SS confidence 
















Query Sequence  TCCQRYRLPDVQQCGDC
Query Conservation 



 
 


   

 
Alig confidence 







.







Template Conservation 



 


.

  



Template Sequence  VCCVSNKA. EDSRCVSC
Template Known Secondary structure  TT


T.T
SB
TTT
Template Predicted Secondary structure 


.



Template SS confidence 
















   797..800.... .....810..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions