Job Description P39405 Confidence 97.54% Date Thu Jan 5 12:00:41 GMT 2012 Rank 1 Aligned Residues 141 % Identity 13% Template c3ffeB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:acsd; PDBTitle: structure of achromobactin synthetase protein d, (acsd) Resolution 2.25 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	L	A	V	Y	S	D	H	I	Y	R	N	Q	P	M	M	I	R	E	N	K	P	L	I	S	L	W	A	Q	W	Y	I	G	L	M	V	P	P	L	M	L	A	L	L	T	Q	E	K	A	L	D	V	S	P	E	H	F	H	A	E	F	H	E	T	G	R	V	A	C	F	W	V	D	V	C	E	D	K	N	.
Query Conservation																																																																																	.
Alig confidence																		.	.	.	.	.																																										.																	.
Template Conservation																		.	.	.	.	.																																										.
Template Sequence		M	I	Q	T	F	L	R	T	H	Y	G	E	A	L	D	D	.	.	.	.	.	N	A	L	L	Y	W	F	D	D	Y	Q	T	R	L	L	R	P	V	L	S	L	F	F	N	H	G	V	V	M	E	P	H	L	Q	N	S	V	L	V	H	Q	.	Q	G	R	P	Q	Q	V	L	L	R	D	F	E	G	V	K	L
Template Known Secondary structure												S	S					.	.	.	.	.																																	G	G	G							.	T	T											T	T
Template Predicted Secondary structure																		.	.	.	.	.																																										.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.						.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
																								148	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	P	H	S	P	Q	H	R	M	E	.	T	L	I	S	Q	A	L	V	P	V	V	Q	A	L	E	A	T	G	E	I	N	G	K	L	I	W	S	N	T	G	Y	L	I	N	W	Y	L	T	E	M	K	Q	L	L	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																													.	.
Template Conservation																																																																																.	.
Template Sequence		T	D	D	L	G	I	R	Y	I	D	D	D	I	H	P	R	V	R	Q	S	L	L	Y	S	R	E	Q	G	W	N	R	I	M	Y	C	L	F	I	N	H	L	S	E	T	I	L	A	L	S	Q	G	R	P	Q	L	A	P	L	M	W	R	R	V	Q	Q	Q	L	R	A	I	Q	G	E	L	K	Q	P	S	.	.
Template Known Secondary structure			T	T	T	G	G	G	G	S		T	T	S																									T	T	T									T	T	T		G	G	G																				S	S			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	V	E	S	L	R	H	A	L	F	F	E	K	T	L	T
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	E	L	D	A	L	I	A	G	H	P	V	A
Template Known Secondary structure		.	.	.	.								T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						549	550	.	.	.	.	.	.	.	.	.	560	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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