Return to main results Retrieve Phyre Job Id

Job DescriptionP39405
Confidence4.21%DateThu Jan 5 12:00:41 GMT 2012
Rank100Aligned Residues16
% Identity31%Templatec1zmeD_
PDB info PDB header:transcription/dnaChain: D: PDB Molecule:proline utilization transcription activator; PDBTitle: crystal structure of put3/dna complex
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........
Predicted Secondary structure 















Query SS confidence 




















Query Sequence  LVRRTCCQRYRLPDVQQCGDC
Query Conservation    





 
 


   

 
Alig confidence 






.....








Template Conservation 
 

 

.....
   

  
Template Sequence  RKRHIKC. . . . . PGGNPCQKC
Template Known Secondary structure  T


.....

STT
Template Predicted Secondary structure 



.....







Template SS confidence 




















   38.40.... .....50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions