 |
Job Description | P76142 | Confidence | 22.58% | Date | Thu Jan 5 12:19:35 GMT 2012 |
Rank | 381 | Aligned Residues | 120 |
% Identity | 13% | Template | d1xrsb1 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.80 |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | A | E | R | I | A | F | I | P | K | L | V | G | V | G | F | F | T | S | G | G | N | G | A | Q | Q | A | G | K | E | L | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | T | Y | D | G | P | T | E | P | S | V | S | G | Q | V | Q | L | I | N | N | F | V | N | Q | G | Y | N | A | I | I | V | S | A | V | S | P |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
| . |
|   |   |
|
|   | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|
Template Sequence |   |
N | I | G | R | K | I | V | V | V | G | A | S | T | G | T | D | A | H | T | V | G | I | D | A | I | M | N | M | K | G | Y | A | G | H | Y | G | L | E | R | Y | E | M | I | D | A | Y | N | L | . |
G | S | Q | V | A | N | . |
. |
. |
E | D | F | I | K | K | A | V | E | L | E | A | D | V | L | L | V | S | Q | T | V | T |
Template Known Secondary structure |   |
 | T |
| S |
|  |  |  |  |  |  |  | B | T | T |
|
|
|
|  |  |  |  |  |  |  | S | T | T |
| B | T | T | B |
|
| G | G | G |
| T | T |  |  |  |  |  |
| . |
| S | S | B |
|  | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | |
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
  |   |
96 | |
|
|
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | . |
. |
. |
. |
. |
. |
G | L | C | P | A | L | K | R | A | M | Q | R | G | V | . |
. |
. |
R | V | L | T | W | D | S | D | T | K | P | E | C | R | S | Y | . |
. |
. |
Y | I | N | Q | G | T | P | A | Q | L | G | G | M | L | V | D | M | A | A | R | Q | V |
Query Conservation |   |
  | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |
|
| . | . | . |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
Template Sequence |   |
Q | K | N | V | H | I | Q | N | M | T | H | L | I | E | L | L | E | A | E | G | L | R | D | R | F | V | L | L | C | G | G | P | R | I | N | N | E | I | A | K | E | L | G | Y | D | A | G | F | G | P | G | R | F | A | D | D | V | A | T | F | A | V | K | T | L |
Template Known Secondary structure |   |
T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | S |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  | T | T | T |
| S |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|