Job Description P76142 Confidence 97.24% Date Thu Jan 5 12:19:35 GMT 2012 Rank 100 Aligned Residues 219 % Identity 10% Template c3sm9A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:metabotropic glutamate receptor 3; PDBTitle: crystal structure of metabotropic glutamate receptor 3 precursor in2 presence of ly341495 antagonist Resolution 2.26 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.												.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Query Sequence		I	S	M	N	V	Q	A	A	E	R	I	A	F	I	P	K	L	.	.	.	.	.	.	.	.	.	.	.	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	.	.	.	.	.	.	.	.	G	V	D	V	T	Y	.	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		R	E	I	K	I	E	G	D	L	V	L	G	G	L	F	P	I	N	E	K	G	T	T	E	E	C	G	R	I	N	E	D	R	G	I	Q	R	L	E	A	M	L	F	A	I	D	E	I	N	K	D	D	Y	L	L	P	G	V	K	L	G	V	H	I	L	D	T	C	S	R	D	T	Y	A	L	E	Q	S	L	E
Template Known Secondary structure									S																	S						T	T	T	T																		S	S	S	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure											.																																		.	.	.	.
Query SS confidence											.																																		.	.	.	.
Query Sequence		F	V	N	Q	G	Y	N	A	I	.	I	V	S	A	V	S	P	D	G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P	.	.	.	.	E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K
Query Conservation											.																																		.	.	.	.
Alig confidence											.																																		.	.	.	.																												.	.
Template Conservation																																																																												.	.
Template Sequence		F	V	R	A	S	L	L	I	A	G	V	I	G	G	S	Y	S	S	V	S	I	Q	V	A	N	L	L	R	L	F	Q	I	P	Q	I	S	Y	A	S	T	S	A	K	L	S	D	K	S	R	Y	D	Y	F	A	R	T	V	P	P	D	F	Y	Q	A	K	A	M	A	E	I	L	R	F	F	.	.	N	W	T	Y
Template Known Secondary structure					T											S	S												G	G	G	T						S	S				G	G	G	G		T	T	T	T	T	T				S	S			T														T	.	.	T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A	K	E	H	P	G	W	E	I	V	T	T	Q	F	G	Y	N	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	A	P	D	A	N	A	L	P	A	A	A	Q	A	A	E	N
Query Conservation
Alig confidence								.	.																				.	.
Template Conservation								.	.																				.	.
Template Sequence		V	S	T	V	A	S	.	.	E	G	D	Y	G	E	T	G	I	E	A	F	E	Q	E	A	R	L	R	.	.	N	I	S	I	A	T	A	E	K	V	G	R	I	R	K	S	Y	D	S	V	I	R	E	L	L	Q	K	P	N	A	R	V	V	V	L	F	M	R	S	D	D	S	R	E	L	I	A	A	A	S	R
Template Known Secondary structure								.	.	S	S																T	T	.	.	T																									T		T	T
Template Predicted Secondary structure								.	.																				.	.
Template SS confidence
		188	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		235	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	D	K	V	A	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	A	S	F	T	W	V	A	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions