Job Description P76142 Confidence 25.00% Date Thu Jan 5 12:19:35 GMT 2012 Rank 357 Aligned Residues 200 % Identity 9% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.															.	.	.
Query SS confidence																																.	.	.	.	.	.	.															.	.	.
Query Sequence		P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	.	.	.	.	.	.	.	P	D	G	L	C	P	A	L	K	R	A	M	Q	R	.	.	.	G	V	R	V	L	T	W	D	S	D	T	K	P	E	C	R	S	Y	Y	I	N	Q	G	T	P	A
Query Conservation																																.	.	.	.	.	.	.															.	.	.
Alig confidence																																.	.	.	.	.	.	.															.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	A	I	D	E	K	A	F	C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	S	N	S	T
Template Known Secondary structure		T	S		B															T	T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S		B				.	.	.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80														.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A	K	E	H	P	G	W	E	I	V	T	T	Q	F	.	G	Y	N	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D
Query Conservation																																																												.
Alig confidence															.	.	.																																											.								.	.
Template Conservation															.	.	.																																																			.	.
Template Sequence		S	E	A	V	E	L	A	K	H	A	E	K	A	.	.	.	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	.	.	E	T	M	R	D	L	C	R	D	F	K	N
Template Known Secondary structure														T	.	.	.	T		S									S	S																			S	S												S	S					.	.											T	T
Template Predicted Secondary structure															.	.	.																																																			.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	I	I	A	P	D	A	N	A	L	P	A	A	A	Q	A	A	E	N	L	K	N	D	K	V	A	I	V	G	F	S	T	P	N	V	M	R	P	Y	V	E	R	G	T	V	K	E	F	G	L	W	D	V	V	Q	Q	G	K	I	S	V	Y	V	A	D	A	L	L	K	K	G
Query Conservation
Alig confidence													.	.																			.														.
Template Conservation													.	.																			.														.
Template Sequence		I	I	G	V	K	D	A	T	G	K	I	.	.	E	R	A	S	E	Q	R	E	K	C	G	K	D	F	V	Q	L	S	.	G	D	D	C	T	A	L	G	F	N	A	H	G	.	G	V	G	C	I	S	V	S	S	N	V	A	P	K	L	C	A	Q	L	H	A	A	C	L	C	S	D
Template Known Secondary structure									S			T	.	.												T	T	S					.	S		T	T	T								T	.							S	G	G	G	T														T	T
Template Predicted Secondary structure													.	.																			.														.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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