Job Description P76142 Confidence 99.93% Date Thu Jan 5 12:19:35 GMT 2012 Rank 62 Aligned Residues 238 % Identity 13% Template c3s99A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:basic membrane lipoprotein; PDBTitle: crystal structure of a basic membrane lipoprotein from brucella2 melitensis, iodide soak Resolution 2.05 Å

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		27	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure													.	.																					.	.
Query SS confidence													.	.																					.	.
Query Sequence		A	E	R	I	A	F	I	P	K	L	V	.	.	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	.	.	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	P	D	G	L	C	P	A	L
Query Conservation													.	.																					.	.
Alig confidence													.	.																					.	.							.
Template Conservation																																											.
Template Sequence		K	L	K	V	G	F	I	Y	I	G	P	P	G	D	F	G	W	T	Y	Q	H	D	Q	A	R	K	E	L	V	E	A	L	G	D	K	V	E	T	T	F	L	.	E	N	V	A	E	G	A	D	A	E	R	S	I	K	R	I	A	R	A	G	N	K	L	I	F	T	T	S	F	G	Y	M	D	P	T	V	K	V
Template Known Secondary structure										S	S		G	G	G	S	S																	T	T	T							.		S			T	T													T	T		S						S	G	G	G
Template Predicted Secondary structure																																											.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P	E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A	K	E	H
Query Conservation
Alig confidence						.																						.	.												.								.														.
Template Conservation						.																						.	.												.								.														.
Template Sequence		A	K	K	F	.	P	D	V	K	F	E	H	A	T	G	Y	K	T	A	D	N	M	S	A	Y	N	.	.	A	R	F	Y	E	G	R	Y	V	Q	G	.	V	I	A	A	K	M	S	.	K	K	G	I	A	G	Y	I	G	S	V	P	V	.	P	E	V	V	Q	G	I	N	S	F	M	L	G	A	Q	S	V	N
Template Known Secondary structure			T	T		.	T	T	S						S					B	T	T						.	.												.								.	S	S												.																T	T
Template Predicted Secondary structure						.																						.	.												.								.														.
Template SS confidence
		99	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	G	W	E	I	V	T	T	Q	F	G	Y	N	.	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	A	P	D	A	N	A	L	P	A	A	A	Q	A	A	E	N	L	K	N	D	K	V	A	I	V	G	F	S	T	P	N	V	M	R	P	Y	V	E	R	G	T	V	K
Query Conservation															.
Alig confidence															.																				.	.									.	.											.	.	.												.	.	.
Template Conservation																																			.	.									.	.											.	.	.												.	.	.
Template Sequence		P	D	F	R	V	K	V	I	W	V	N	S	W	F	D	P	G	K	E	A	D	A	A	K	A	L	I	D	Q	G	V	D	I	.	.	I	T	Q	H	T	D	S	T	.	.	A	A	I	Q	V	A	H	D	R	G	.	.	.	I	K	A	F	G	Q	A	S	D	M	I	.	.	.	K	F	A	P	D	T	Q	L
Template Known Secondary structure		T	T									S	S	S																T	T		S		.	.				S	S	S	S	S	.	.									T	T	.	.	.								S			G	.	.	.	G	G	S	T	T	T
Template Predicted Secondary structure																																			.	.									.	.											.	.	.												.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	G	L	W	D	V	V	Q	Q	G	K	I	S	V	Y	V	A	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	V	V	D	E	W	G	P	Y	Y	I	D	R	A	K	A	V	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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