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Job DescriptionP76142
Confidence78.45%DateThu Jan 5 12:19:35 GMT 2012
Rank152Aligned Residues215
% Identity11%Templatec3re1B_
PDB info PDB header:lyaseChain: B: PDB Molecule:uroporphyrinogen-iii synthetase; PDBTitle: crystal structure of uroporphyrinogen iii synthase from pseudomonas2 syringae pv. tomato dc3000
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60..... ....70.........80.........90.........100....... ..110..
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Query Sequence  TSGGNGAQQAGKELGVDVTYDGP. . . . . TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ. . . . . RGVRV
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Template Sequence  AEESAALARVLADAGIFSSSL. PLLETEPLPLTPAQRSIIFEL. . LNYSAVIVV. . SKPAARLAIELIDEVWPQPPMQPW
Template Known Secondary structure  TT

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SSSTG..GGSS
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   12.......20.........30.. .......40.........50... ......60.. .......70.........80......
 
   113..... .120.........130.........140.........150.........160.........170.........180........
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Query Sequence  LTWDSD. . . . TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV
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Template Sequence  FSVGSATGQILLDYGLDASWPEQGDDSEALLDHPRLKQAIAVPGSRVLIMRGNEGR. . . . . . . ELLAEQLRERGVGVDYL
Template Known Secondary structure  SSTTT


TT
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   87..90.........100.........110.........120.........130.........140.. .......150.........
 
   189190.........200.........210.........220.........230...... ...240.........250.........260......
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Query Sequence  TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK. . NDKVAIVGFSTPNVMRPYVERGTVKEFGLW
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Template Sequence  PLYRRYLPQHAPGTLLQRVEVE. . RLNGLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVP. SPRVASLAQAAGARNVIDCR
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TTT..T


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   160.........170.........180. ........190.........200.........210...... ...220.........230......
 
   267..270..
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Query Sequence  DVVQQG
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Template Sequence  GASAAA
Template Known Secondary structure  SSS
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   237..240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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