Job Description P76142 Confidence 24.88% Date Thu Jan 5 12:19:35 GMT 2012 Rank 358 Aligned Residues 87 % Identity 9% Template c3k2dA_ PDB info PDB header:immune system Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus Resolution 2.60 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	N	V	Q	A	A	E	R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	P	D	G	L	C	P
Query Conservation
Alig confidence																.	.	.	.																															.	.	.	.	.																					.	.	.	.	.
Template Conservation																.	.	.	.																															.	.	.	.	.																					.	.	.	.	.
Template Sequence		G	H	M	D	T	S	K	V	K	V	G	V	M	A	.	.	.	.	G	A	E	A	Q	V	A	E	V	A	A	K	V	A	K	E	K	Y	G	L	D	V	E	L	V	T	F	T	D	Y	.	.	.	.	.	V	T	P	N	A	A	L	D	D	G	S	I	D	M	N	A	F	Q	H	K	.	.	.	.	.	P	Y
Template Known Secondary structure				S											T	.	.	.	.	T																											S		T	.	.	.	.	.	T	S								T	S		S								.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.																															.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	R	Q	V	E	D	R	D	Y	K	L	T	I	A	G	N	T	F	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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