Return to main results Retrieve Phyre Job Id

Job DescriptionP76142
Confidence60.89%DateThu Jan 5 12:19:35 GMT 2012
Rank198Aligned Residues63
% Identity10%Templatec3iz6A_
PDB info PDB header:ribosomeChain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110..... ....120.........130.........140.......
Predicted Secondary structure 










.










Query SS confidence 
































.































Query Sequence  QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW. DSDTKPECRSYYINQGTPAQLGGMLVDMAARQ
Query Conservation     
 


           
  
   




  .
               
    
      
   
Alig confidence 








..





















.































Template Conservation    





 ..

  
  

 

  
 





 


  
  

  

 



  

 

  


 
Template Sequence  SEPRLLILT. . DPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLAR
Template Known Secondary structure  S

SS..
TTTTT


TTS
GGG
SS

SST
Template Predicted Secondary structure 



..























Template SS confidence 

































































   121........ 130.........140.........150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions