Job Description P76142 Confidence 99.93% Date Thu Jan 5 12:19:35 GMT 2012 Rank 64 Aligned Residues 240 % Identity 15% Template c3bilA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable laci-family transcriptional regulator; PDBTitle: crystal structure of a probable laci family transcriptional2 regulator from corynebacterium glutamicum Resolution 2.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	P	D	G	L	C	P	A	L	K	R	A	M	Q	R
Query Conservation
Alig confidence																																					.																																.	.	.
Template Conservation																																					.																																.	.	.
Template Sequence		T	I	G	V	I	V	P	S	L	I	N	H	Y	F	A	A	M	V	T	E	I	Q	S	T	A	S	K	A	G	L	A	T	I	I	T	.	N	S	N	E	D	A	T	T	M	S	G	S	L	E	F	L	T	S	H	G	V	D	G	I	I	C	V	P	N	E	E	.	.	.	C	A	N	Q	L	E	D	L	Q	K
Template Known Secondary structure								S		S	S	S																	T	T							.			T	T															T	T		S								G	G	.	.	.	G
Template Predicted Secondary structure																																					.																																.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	R	V	L	T	W	D	S	D	T	K	P	E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A	K	E	H	P	G	W	E	I	V
Query Conservation
Alig confidence																				.	.																				.	.	.																																				.	.
Template Conservation																				.	.																				.	.	.																																				.	.
Template Sequence		Q	M	P	V	V	L	V	D	R	E	L	P	G	D	T	I	P	T	.	.	A	T	S	N	P	Q	P	G	I	A	A	A	V	E	L	L	A	H	N	.	.	.	N	A	L	P	I	G	Y	L	S	G	P	M	D	T	S	T	G	R	E	R	L	E	D	F	K	A	A	C	A	N	S	K	I	G	E	.	.	Q
Template Known Secondary structure									S	S			S							.	.																			T	.	.	.	T			S								T	T	S																	T	T				.	.
Template Predicted Secondary structure																				.	.																				.	.	.																																				.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		T	T	Q	F	G	Y	N	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	A	P	D	A	N	A	L	P	A	A	A	Q	A	A	E	N	L	K	N	.	.	.	D	K	V	A	I	V	G	F	S	T	P	N	V	M	R	P	Y	V	E	R	G	T	V	K	E	F	G	L
Query Conservation																																																			.	.	.
Alig confidence																											.	.																							.	.	.													.										.	.
Template Conservation																											.	.																																						.										.	.
Template Sequence		L	V	F	L	G	G	Y	E	Q	S	V	G	F	E	G	A	T	K	L	L	D	Q	G	A	K	.	.	T	L	F	A	G	D	S	M	M	T	I	G	V	I	E	A	C	H	K	A	G	L	V	I	G	K	D	V	S	V	I	G	F	D	T	H	P	.	L	F	A	L	Q	P	H	P	L	.	.	T	V	I	D
Template Known Secondary structure								S	S														T	T		S	.	.					S	S														T	T			B	T	T	T	B						S			G	.	G	G	G	G	S	S	S			.	.
Template Predicted Secondary structure																											.	.																																						.										.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.			.	290	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	V	V	Q	Q	G	K	I	S	V	Y	V	A	D	A	L	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	V	E	Q	L	A	Q	R	A	V	S	I	L	T	E	L	T	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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