Job Description P76142 Confidence 75.91% Date Thu Jan 5 12:19:35 GMT 2012 Rank 158 Aligned Residues 68 % Identity 12% Template c3bbnB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:ribosomal protein s2; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																	.														.
Query SS confidence																																	.														.
Query Sequence		Y	N	A	I	I	V	S	A	V	S	P	D	G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	.	D	S	D	T	K	P	E	C	R	S	Y	Y	I	.	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K
Query Conservation																																	.														.
Alig confidence									.	.																							.														.
Template Conservation									.	.
Template Sequence		P	D	I	V	I	I	V	.	.	D	Q	Q	E	E	Y	T	A	L	R	E	C	I	T	L	G	I	P	T	I	C	L	I	D	T	N	C	N	P	D	L	A	D	I	S	I	P	A	N	D	D	A	I	A	S	I	R	L	I	L	T	K	L	V	F	A	I	C	E	G	R	S	S
Template Known Secondary structure			S					S	.	.		T	T	T	T									T	T	T									S	S	S			S	S		S							S	S	S																		T	S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		162	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions