Job Description P76142 Confidence 26.72% Date Thu Jan 5 12:19:35 GMT 2012 Rank 346 Aligned Residues 98 % Identity 13% Template c2w42A_ PDB info PDB header:protein/dna complex Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of a piwi protein from archaeoglobus fulgidus2 complexed with a 16nt dna duplex. Resolution 1.90 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																																		.
Query SS confidence																																							.	.	.	.																																		.
Query Sequence		S	M	N	V	Q	A	A	E	R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	.	.	.	.	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	.	S	A	V	S	P
Query Conservation																																							.	.	.	.																																		.
Alig confidence																																							.	.	.	.																																		.
Template Conservation
Template Sequence		E	V	P	S	L	K	Y	N	Q	I	A	L	I	H	N	N	Q	F	S	S	L	I	N	Q	L	K	S	Q	I	S	S	K	I	D	E	V	W	H	I	H	N	I	N	I	S	E	F	I	Y	D	S	P	H	F	D	S	I	K	S	Q	V	D	N	A	I	D	T	G	V	D	G	I	M	L	V	L	P	E	Y	N
Template Known Secondary structure		B					S	S	S							S		T	T																		T	T				S									S	S	S	S																	S							S	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	L	Y	Y	K	L	K	S	Y	L	I	N	S	I	P	S	Q	F	M	R	Y	D
Template Known Secondary structure														T	T	S							G	G
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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