Job Description P76142 Confidence 100.00% Date Thu Jan 5 12:19:35 GMT 2012 Rank 3 Aligned Residues 285 % Identity 15% Template c2rjoA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans Resolution 2.05 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		A	E	R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	.	.	S	A	V	S	P	D	G	L	C	P	A	L	K	R
Query Conservation																																																																		.	.
Alig confidence																																							.																											.	.
Template Conservation																																							.
Template Sequence		Q	T	T	L	A	C	S	F	R	S	L	T	N	P	Y	Y	T	A	F	N	K	G	A	Q	S	F	A	K	S	V	G	L	P	Y	V	P	L	.	T	T	E	G	S	S	E	K	G	I	A	D	I	R	A	L	L	Q	K	T	G	G	N	L	V	L	N	V	D	P	N	D	S	A	D	A	R	V	I	V	E	A
Template Known Secondary structure										S		T	T	S																		T							.			T	T																T	T	T									S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P	.	.	.	.	.	.	E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																													.
Template Conservation																																																					.
Template Sequence		C	S	K	A	G	A	Y	V	T	T	I	W	N	K	P	K	D	L	H	P	W	D	Y	N	P	N	Y	V	A	H	L	S	Y	D	G	V	A	Y	G	E	E	T	A	T	Q	L	F	K	S	X	G	.	G	K	G	G	V	V	A	L	G	G	I	F	S	N	V	P	A	I	E	R	K	A	G	L	D	A	A	L
Template Known Secondary structure						T							S				T	T			G	G	G	G	T	T	T																								T	T	.	T											T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																															.																															.
Query SS confidence																															.																															.
Query Sequence		A	K	E	H	P	G	W	E	I	V	T	T	Q	F	G	Y	N	D	A	T	K	S	L	Q	T	A	E	G	I	.	L	K	A	Y	S	D	L	D	A	I	I	A	P	D	A	N	A	L	P	A	A	A	Q	A	A	E	N	L	K	N	.	D	K	V	A	I	V	G	F	S	T	P	N	V	M	R	P	Y	V	E
Query Conservation																															.																															.
Alig confidence				.																											.																															.
Template Conservation				.
Template Sequence		K	K	.	F	P	G	I	Q	L	L	D	F	Q	V	A	D	W	N	S	Q	K	A	F	P	I	X	Q	A	W	X	T	R	F	N	S	K	I	K	G	V	W	A	A	N	D	D	X	A	L	G	A	I	E	A	L	R	A	E	G	L	A	G	Q	I	P	V	T	G	X	D	G	T	Q	P	G	L	V	A	I	K
Template Known Secondary structure			T	.		T	T										T	T																	G	G	G							S	S														T	T		B	T	T	B					S	B
Template Predicted Secondary structure				.
Template SS confidence
		198	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	T	V	K	E	F	G	L	W	D	V	V	Q	Q	G	K	I	S	V	Y	V	A	D	A	L	L	K	K	G	S	M	K	T	G	D	K	L	D	I	K	G	V	G	Q	V	E	V	S	P	N	S	V	Q	G	Y	D	Y	E	A	D	G	N	G	I	V	L	L	P	E	R	V	I	F	N	K	E	N	I	G
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	E	L	V	A	S	V	D	W	D	P	F	W	L	G	G	I	G	L	S	X	G	L	Q	A	K	E	K	K	I	D	L	A	T	L	P	K	D	R	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	C	T	A	T	F	V	T	K	T	N	V	Q
Template Known Secondary structure		T	T	S			B																						T	T		S		G	G	G	S		G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.																									.	320	.	.	.	.	.	.	.	.	.	330	.	.
		337	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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