Job Description P76142 Confidence 22.06% Date Thu Jan 5 12:19:35 GMT 2012 Rank 387 Aligned Residues 182 % Identity 17% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	P	D	G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D	R	L	T	E	L	H	D	V	A	V	A	N	G	A	G	A	L	L	I	N	A	M	P	.	V	G	L	S	A	V	R	M	L	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	A	A
Template Known Secondary structure																	S	S												T	T												T	T											.											T	T			S							T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A	K	E	H	P	G	W	E	I	V	T	T	Q	F	G	Y	N	D	A	T	K	S	L
Query Conservation
Alig confidence												.	.												.	.	.	.	.	.																																																	.	.	.
Template Conservation												.	.												.	.	.	.	.	.																																																	.	.	.
Template Sequence		F	S	R	L	A	N	Y	G	I	H	.	.	S	R	V	M	T	R	L	Q	R	L	A	.	.	.	.	.	.	G	F	D	V	V	I	M	P	G	F	G	P	R	M	M	T	P	E	H	E	V	L	D	C	I	R	A	C	L	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G	S	D	S	A	.	.	.
Template Known Secondary structure				S		T	T	S				.	.												.	.	.	.	.	.	T		S							S	S	G	G	G																S		B	T	T	B									S	S			T	.	.	.
Template Predicted Secondary structure												.	.												.	.	.	.	.	.																																																	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	A	P	D	A	N	A	L	.	.	.	.	.	.	P	A	A	A	Q	A	A	E	N	L
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	L	E	N	V	Y	R	K	V	G	S	A	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	A	A	G	A	T	S	I	R	Q	A
Template Known Secondary structure		T	T										S	S							S	T	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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