Job Description P76142 Confidence 42.63% Date Thu Jan 5 12:19:35 GMT 2012 Rank 256 Aligned Residues 86 % Identity 16% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	I	S	M	N	V	Q	A	A	E	R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	P	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.																.	.																											.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																.	.																											.	.	.	.	.
Template Sequence		M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	.	.	.	.	.	.	.	K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	.	.	L	F	S	S	E	D	E	I	T	T	L	I	S	K	V	K	T	E	N	I	K	I	V	V	S	G	.	.	.	.	.
Template Known Secondary structure									G	G	G		S								S	S		S	S		.	.	.	.	.	.	.									T							.	.				S	G	G	G											T	T								.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.																.	.																											.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	K	T	V	T	D	E	A	I	K	Q	G	L	Y	G	E	T	I	N	S	G
Template Known Secondary structure		.	.										T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions