Job Description P76142 Confidence 23.41% Date Thu Jan 5 12:19:35 GMT 2012 Rank 371 Aligned Residues 199 % Identity 13% Template c2ehhE_ PDB info PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus Resolution 1.90 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	.	.	.	.	.	.	.	V	S	P	D	G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P	E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V
Query Conservation																										.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	E	A	L	G	N	L	I	E	F	H	V	D	N	G	T	D	A	I	L	V	C	G	T	T	G	E	S	P	T	L	T	F	E	E	H	E	K	V	I	E	F	A	V	K	R	.	.	.	.	.	.	.	.	.	.	A	A	G	R	I	K	V	I	A	G	T	G	G	N	A	T	H	E	A	V	H	L	T
Template Known Secondary structure															T	T	T		S					S	S	T	T	T	T	G	G	G	S																.	.	.	.	.	.	.	.	.	.		T	T	S	S									S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.											.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A	K	E	H	P	G	W	E	I	V	T	T	Q	F	.	G	Y	N	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	A	P
Query Conservation																																																					.
Alig confidence								.	.	.																																											.								.	.
Template Conservation								.	.	.																																																			.	.
Template Sequence		A	H	A	K	E	V	.	.	.	G	A	D	G	A	L	V	V	V	P	Y	Y	N	K	P	T	Q	R	G	L	Y	E	H	F	K	T	V	A	Q	E	V	D	I	P	I	I	I	Y	N	I	P	S	R	T	C	V	E	I	S	V	.	.	D	T	M	F	K	L	A	S	E	C	E	N	I	V	A	S	K	E	S
Template Known Secondary structure							T	.	.	.	T		S									S	S																				S												S						.	.											T	T
Template Predicted Secondary structure								.	.	.																																																			.	.
Template SS confidence
		89	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	N	A	L	P	A	A	A	Q	A	A	E	N	L	K	N	D	K	V	A	I	V	G	F	S	T	P	N	V	M	R	P	Y	V	E	R	G	T	V	K	E	F	G	L	W	D	V	V	Q	Q	G	K	I	S	V	Y	V	A	D	A	L	L	K	K	G
Query Conservation
Alig confidence					.	.																				.														.
Template Conservation					.	.																				.														.
Template Sequence		T	P	N	.	.	M	D	R	I	S	E	I	V	K	R	L	G	E	S	F	S	V	L	S	.	G	D	D	S	L	T	L	P	M	M	A	L	G	.	A	K	G	V	I	S	V	A	N	N	V	M	P	R	E	V	K	E	L	I	R	A	A	L	E	G	D
Template Known Secondary structure			S		.	.											S		T	T						.	S		G	G	G							T	T	.							S	G	G	G	T														T	T
Template Predicted Secondary structure					.	.																				.														.
Template SS confidence
		164	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions