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Job DescriptionP76142
Confidence89.30%DateThu Jan 5 12:19:35 GMT 2012
Rank120Aligned Residues220
% Identity10%Templatec2e4zA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:metabotropic glutamate receptor 7; PDBTitle: crystal structure of the ligand-binding region of the group iii2 metabotropic glutamate receptor
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30..... ....40.........50...... ...60.. .......70.........
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Query Sequence  SMNVQAAERIAFIPK. . . . . . . . . . . . LVGVGFFTSGGNGAQQAGKEL. . . . . . . . GVDVTY. DGPTEPSVSGQVQLINN
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Template Sequence  SIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRENGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTYALEQSLT
Template Known Secondary structure 

S


SSS
S

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TT
GGG
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   42.......50.........60.........70.........80.........90.........100.........110.........120.
 
   80.. .......90.........100.........110.........120. ........130.........140.........150
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Query Sequence  FVN. . . . . QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP. . . . ECRSYYINQGTPAQLGGMLVDMAARQVNK
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Template Sequence  FVQALIQKPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKAL. .
Template Known Secondary structure  GGGGG







SSTTTT

SS


GGGG
TTTTSSSS

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   122.......130.........140.........150.........160.........170.........180.........190.........
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ
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Template Sequence  GWNYVSTLAS. . EGSYGEKGVESFTQISKEAGGLCIAQSVRIPTI. . . DFDRIIKQLLDTPNSRAVVIFANDEDIKQILA
Template Known Secondary structure  T


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   217..220...... ...230.........240.........250......... 260.........270.........280.........290.
 
   231..... ...240.......
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Query Sequence  AAENLK. NDKVAIVGFST
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Template Conservation               
    
Template Sequence  AAKRADQVGHFLWVGSDS
Template Known Secondary structure  TT
TTTS
TT
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   298.300.........310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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