Job Description P76142 Confidence 87.58% Date Thu Jan 5 12:19:35 GMT 2012 Rank 124 Aligned Residues 170 % Identity 14% Template c2dgdD_ PDB info PDB header:lyase Chain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii Resolution 2.90 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.															.	.	.
Query SS confidence																																					.	.	.	.	.	.															.	.	.
Query Sequence		R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	T	Y	D	.	.	.	.	.	.	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	.	.	.	N	N	F	V	N	Q	G	Y	N	A	I	I	V	S	A	V	S	P	D	G	L	C
Query Conservation																																					.	.	.	.	.	.															.	.	.
Alig confidence												.	.	.	.														.								.	.	.	.	.	.															.	.	.
Template Conservation												.	.	.	.														.
Template Sequence		R	I	G	V	I	L	P	A	N	N	.	.	.	.	A	G	X	E	Y	D	L	W	K	X	A	P	E	.	G	V	S	I	H	S	T	R	X	K	P	T	K	G	C	E	P	E	N	V	E	E	F	E	K	E	L	K	Y	S	Y	S	L	L	A	E	V	S	D	I	I	I	Y	G	R	T	Y	G	T	H	K	H
Template Known Secondary structure									T	T		.	.	.	.		S											T	.	T												S	S	S	S		S	S																T	T	T		S								T	T	T	T	T
Template Predicted Secondary structure												.	.	.	.														.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P	E	C	R	S	Y	Y	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	K	E	A	K	A	K	I	A
Query Conservation
Alig confidence								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.													.	.	.	.	.
Template Conservation								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.													.	.	.	.	.
Template Sequence		A	H	V	I	K	R	.	.	V	I	K	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	E	E	S	V	Y	E	L	L	K	K	L	.	.	.	.	.	.	N	V	R	K	L	W	I	G	T	P	Y	I	.	.	.	.	.	K	E	R	T	L	E	E	V	E	W	W	R
Template Known Secondary structure								.	.		S	T	T		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	.	.	.	.	.	.	T									S	S		.	.	.	.	.
Template Predicted Secondary structure								.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.			.	.	90	.	.	.																			.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																								.
Query SS confidence																		.	.	.	.	.	.	.																								.
Query Sequence		K	E	H	P	G	W	E	I	V	T	T	Q	F	G	Y	N	.	.	.	.	.	.	.	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	.	A	P	D	A	N	A	L	P	A	A	A	Q	A	A	E	N
Query Conservation																		.	.	.	.	.	.	.																								.
Alig confidence																		.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		N	K	G	F	E	I	V	G	Y	D	G	L	G	K	I	R	G	I	D	I	S	N	T	P	I	F	T	I	Y	R	L	V	K	R	H	L	N	E	V	L	K	A	D	A	V	Y	I	A	C	T	A	L	S	T	Y	E	A	V	Q	Y	L	H	E
Template Known Secondary structure		T	T	T													S						T												T	T					T	T	S	S							T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions