Job Description P76142 Confidence 28.90% Date Thu Jan 5 12:19:35 GMT 2012 Rank 332 Aligned Residues 226 % Identity 14% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.				.	.	.	.	.
Predicted Secondary structure																																									.																								.									.	.	.
Query SS confidence																																									.																								.									.	.	.
Query Sequence		M	N	V	Q	A	A	E	R	I	A	F	I	P	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	Q	A	G	K	E	L	G	V	D	V	.	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	I	N	N	F	V	N	Q	.	G	Y	N	A	I	I	V	S	.	.	.	A	V	S	P	D
Query Conservation																																									.																								.									.	.	.
Alig confidence																		.	.	.	.	.	.																		.																								.									.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		I	T	V	A	K	K	G	N	V	A	F	I	S	Q	S	G	.	.	.	.	.	.	A	L	G	A	G	I	V	Y	K	T	I	K	E	D	I	G	F	S	K	F	I	S	V	G	N	X	A	D	V	D	F	A	E	L	X	E	Y	L	A	D	T	E	E	D	K	A	I	A	L	Y	I	E	G	V	R	N	G	K
Template Known Secondary structure		S							S						S			.	.	.	.	.	.													T	T				S						T	T		S	S	S											T		S	S									S			S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																	.	.	.																																													.	.
Query SS confidence																																	.	.	.																																													.	.
Query Sequence		G	L	C	P	A	L	K	R	A	M	Q	R	G	V	R	V	L	T	W	D	S	D	T	K	P	E	C	R	S	Y	Y	.	.	.	I	N	Q	G	T	P	A	Q	L	G	G	M	L	V	D	M	A	A	R	Q	V	N	K	D	K	A	K	V	A	F	F	Y	S	S	P	T	V	T	D	Q	N	Q	W	V	.	.
Query Conservation																																	.	.	.																																													.	.
Alig confidence												.																					.	.	.																			.																										.	.
Template Conservation												.																																										.
Template Sequence		K	F	X	E	V	A	K	R	V	T	.	K	K	K	P	I	I	A	L	K	A	G	K	K	I	Y	E	A	A	F	K	Q	S	G	V	L	V	A	N	T	I	D	E	X	L	S	X	A	R	A	F	S	.	Q	P	L	P	R	G	N	K	V	A	I	X	T	N	A	G	G	P	G	V	L	T	A	D	E	L	D
Template Known Secondary structure											T	.	T	T	S																				T					S	S										G	G	G	.	S				S	S								S													T
Template Predicted Secondary structure												.																																										.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
												172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																					.	.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																					.	.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	K	E	A	K	A	K	I	A	K	E	H	P	G	W	E	I	V	T	T	Q	.	.	.	F	G	Y	N	D	A	T	K	S	L	Q	T	A	E	G	I	L	K	A	Y	S	D	L	D	A	I	I	A	.	.	.	.	.	.	.	.	.	.	P	D	A	N	A	L	P	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.																					.	.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.	.	.									.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		K	R	G	L	K	L	A	T	L	E	E	K	T	I	E	E	L	R	S	F	L	P	P	X	A	A	V	K	N	P	V	D	X	I	A	S	A	R	G	E	D	.	Y	Y	R	T	A	K	L	L	L	Q	D	P	N	V	D	X	L	I	A	I	C	V	V	P	T	F	A	G	X	T	L	T	E	H	A	E	G	I
Template Known Secondary structure		T	T	T																		S		T	T				S	S						T	T						.												T	T		S											S	T	T			S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	A	E	N	L	K	N	D	K	V	A	I	V	G	F	S	T	P	N	V	M	R	P	Y	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	A	V	K	E	V	N	N	E	K	P	V	L	A	X	F	X	A	G	Y	V	S	E	K	A	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions