Return to main results Retrieve Phyre Job Id

Job DescriptionP33634
Confidence35.41%DateThu Jan 5 11:52:26 GMT 2012
Rank353Aligned Residues198
% Identity11%Templated1xs5a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150..... ....160.....
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Query Sequence  DGELRVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALN. . . RRELGEQSLV
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Template Sequence  KDETVGVGVLSEPHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNV
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STTTTT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   166...170.........180.........190.........200.........210.. .......220.......
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Query Sequence  LVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITV. . . . . . . . . . . . . . . . . . ENTIELISIESIKRC
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Template Sequence  HVEPLALYSRTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPR
Template Known Secondary structure 



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SGGG

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GGG
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GGG
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   228.230.........240.........250.........260.........270.........280......
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Query Sequence  VAANIGVSYLPRFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQCV
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Template Sequence  VFDQVDGAVINGNYAIMAGLSARRDGLAVEPDASAYANVLVVKRGNEADARVQAVLRAL
Template Known Secondary structure  GGGSS
TT

TTTT
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GGGG
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   165....170.........180.........190.........200.........210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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