Return to main results Retrieve Phyre Job Id

Job DescriptionP33634
Confidence99.80%DateThu Jan 5 11:52:26 GMT 2012
Rank15Aligned Residues213
% Identity12%Templated1utha_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  EAAKKESDPDGELRVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRREL
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Template Sequence  RNSFDPFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFFQRRL
Template Known Secondary structure 
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TTT





TT

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TT

TT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   160.........170.... .....180.........190.........200.........210.........220.........230........
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Query Sequence  GEQSLVLVASPQIAD. VDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLP
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Template Sequence  FRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVP
Template Known Secondary structure 
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TTSGGGGTT


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B
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   239240.........250.........260.........270.........280.........290..
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Query Sequence  RFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQCVEESFVA
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Template Sequence  QRFAVRCEVPFGLTTSPHPAKLPDIAINLFWHAKYNRDPGNMWLRQLFVELFSE
Template Known Secondary structure  TTTTT
SS



GGGTT


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   247..250.........260.........270.........280.........290.........300
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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